Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PER3P56645 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 AL627422.1-201ENST00000434104 580 ntBASIC13.11□□□□□ -0.31
PER3P56645 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 AC092638.2-201ENST00000441105 947 ntBASIC13.11□□□□□ -0.31
PER3P56645 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.11□□□□□ -0.31
PER3P56645 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.11□□□□□ -0.31
PER3P56645 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 AC015802.1-201ENST00000588104 1449 ntBASIC13.11□□□□□ -0.31
PER3P56645 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ACE3P-201ENST00000423435 1973 ntBASIC13.11□□□□□ -0.31
PER3P56645 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 PIN4P1-201ENST00000451079 396 ntBASIC13.1□□□□□ -0.31
PER3P56645 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 RN7SL81P-201ENST00000493781 261 ntBASIC13.1□□□□□ -0.31
PER3P56645 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 MIR3188-201ENST00000583494 85 ntBASIC13.1□□□□□ -0.31
PER3P56645 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 MIR6842-201ENST00000612539 65 ntBASIC13.1□□□□□ -0.31
PER3P56645 MIR6858-201ENST00000620733 67 ntBASIC13.1□□□□□ -0.31
PER3P56645 AC133540.1-201ENST00000620845 1019 ntBASIC13.1□□□□□ -0.31
PER3P56645 AC138466.4-201ENST00000623965 852 ntBASIC13.1□□□□□ -0.31
PER3P56645 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 Z98259.2-201ENST00000641583 609 ntBASIC13.1□□□□□ -0.31
PER3P56645 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
PER3P56645 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms