Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 LINC00638-201ENST00000555578 2518 ntBASIC16.04■□□□□ 0.16
KRT2P35908 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT2P35908 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
KRT2P35908 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT2P35908 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT2P35908 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KRT2P35908 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT2P35908 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 AC108024.1-201ENST00000626286 1721 ntBASIC16.03■□□□□ 0.16
KRT2P35908 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 MIR557-201ENST00000385239 98 ntBASIC16.03■□□□□ 0.16
KRT2P35908 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 AL133466.1-201ENST00000447582 150 ntBASIC16.03■□□□□ 0.16
KRT2P35908 RPL18AP8-201ENST00000486071 528 ntBASIC16.03■□□□□ 0.16
KRT2P35908 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT2P35908 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
KRT2P35908 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 RN7SL665P-201ENST00000578793 300 ntBASIC16.03■□□□□ 0.16
KRT2P35908 CU633904.3-201ENST00000624042 1029 ntBASIC16.03■□□□□ 0.16
KRT2P35908 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KRT2P35908 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT2P35908 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 Z98885.3-201ENST00000624882 1757 ntBASIC16.03■□□□□ 0.16
KRT2P35908 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT2P35908 DMBT1P1-203ENST00000636837 4628 ntBASIC16.03■□□□□ 0.16
KRT2P35908 TBC1D3J-201ENST00000620719 1426 ntBASIC16.02■□□□□ 0.16
KRT2P35908 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT2P35908 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 AL358781.1-202ENST00000321081 1360 ntBASIC16.02■□□□□ 0.16
KRT2P35908 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 CAP2P1-201ENST00000557743 1390 ntBASIC16.02■□□□□ 0.16
KRT2P35908 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT2P35908 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
KRT2P35908 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT2P35908 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KRT2P35908 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.02■□□□□ 0.16
KRT2P35908 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT2P35908 AL807761.2-201ENST00000422849 729 ntBASIC16.02■□□□□ 0.16
KRT2P35908 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT2P35908 RPL8P2-201ENST00000430538 502 ntBASIC16.02■□□□□ 0.16
KRT2P35908 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT2P35908 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.02■□□□□ 0.16
KRT2P35908 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
KRT2P35908 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT2P35908 AC132825.4-202ENST00000578792 434 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms