Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA5P30532 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA5P30532 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA5P30532 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA5P30532 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA5P30532 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 AC113367.3-201ENST00000508316 1912 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 AC106785.2-201ENST00000564385 1319 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 SNORA30.1-201ENST00000363193 129 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRNA5P30532 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA5P30532 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA5P30532 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 IQCF4-203ENST00000428561 420 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 ALDOAP1-201ENST00000491506 1078 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 AL109954.3-201ENST00000615088 558 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA5P30532 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA5P30532 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 RCC2P5-201ENST00000492126 1487 ntBASIC16.8■□□□□ 0.28
CHRNA5P30532 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA5P30532 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA5P30532 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRNA5P30532 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AP001331.1-201ENST00000413008 1015 ntBASIC16.79■□□□□ 0.28
CHRNA5P30532 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA5P30532 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA5P30532 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA5P30532 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AC009812.1-201ENST00000605948 1059 ntBASIC16.79■□□□□ 0.28
CHRNA5P30532 MDC1-209ENST00000613547 830 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 AC002350.2-201ENST00000623894 1828 ntBASIC16.79■□□□□ 0.28
CHRNA5P30532 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRNA5P30532 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA5P30532 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA5P30532 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA5P30532 DLX4-206ENST00000611342 1662 ntBASIC16.78■□□□□ 0.28
CHRNA5P30532 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA5P30532 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA5P30532 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms