Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
DEFA4P12838 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
DEFA4P12838 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
DEFA4P12838 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
DEFA4P12838 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 MIR326-201ENST00000362220 95 ntBASIC11.48□□□□□ -0.57
DEFA4P12838 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 AP003171.2-201ENST00000528208 925 ntBASIC11.48□□□□□ -0.57
DEFA4P12838 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.48□□□□□ -0.57
DEFA4P12838 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.48□□□□□ -0.57
DEFA4P12838 AC012645.4-201ENST00000610691 1061 ntBASIC11.48□□□□□ -0.57
DEFA4P12838 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
DEFA4P12838 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
DEFA4P12838 PDIA3P1-201ENST00000471856 1510 ntBASIC11.48□□□□□ -0.57
DEFA4P12838 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.48□□□□□ -0.57
DEFA4P12838 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
DEFA4P12838 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
DEFA4P12838 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.47□□□□□ -0.57
DEFA4P12838 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms