Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.93□□□□□ -0.02
FAM228BP0C875 AL118506.1-201ENST00000601296 3082 ntBASIC14.93□□□□□ -0.02
FAM228BP0C875 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
FAM228BP0C875 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.93□□□□□ -0.02
FAM228BP0C875 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.93□□□□□ -0.02
FAM228BP0C875 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.93□□□□□ -0.02
FAM228BP0C875 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.93□□□□□ -0.02
FAM228BP0C875 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
FAM228BP0C875 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
FAM228BP0C875 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
FAM228BP0C875 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FAM228BP0C875 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 Z98257.2-202ENST00000641138 1548 ntBASIC14.92□□□□□ -0.02
FAM228BP0C875 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
FAM228BP0C875 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
FAM228BP0C875 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.92□□□□□ -0.02
FAM228BP0C875 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
FAM228BP0C875 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
FAM228BP0C875 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
FAM228BP0C875 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
FAM228BP0C875 AL591846.1-201ENST00000451736 433 ntBASIC14.92□□□□□ -0.02
FAM228BP0C875 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.92□□□□□ -0.02
FAM228BP0C875 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.92□□□□□ -0.02
FAM228BP0C875 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 AC005695.3-201ENST00000614522 232 ntBASIC14.92□□□□□ -0.02
FAM228BP0C875 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM228BP0C875 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM228BP0C875 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM228BP0C875 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM228BP0C875 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.91□□□□□ -0.02
FAM228BP0C875 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FAM228BP0C875 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM228BP0C875 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.91□□□□□ -0.02
FAM228BP0C875 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.91□□□□□ -0.02
FAM228BP0C875 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM228BP0C875 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FAM228BP0C875 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM228BP0C875 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FAM228BP0C875 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.91□□□□□ -0.02
FAM228BP0C875 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
FAM228BP0C875 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM228BP0C875 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms