Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AL365181.1-201ENST00000564032 1828 ntBASIC13.18□□□□□ -0.3
CTSBP07858 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 RCC2P5-201ENST00000492126 1487 ntBASIC13.17□□□□□ -0.3
CTSBP07858 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTSBP07858 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTSBP07858 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 OR7E115P-201ENST00000382617 1024 ntBASIC13.17□□□□□ -0.3
CTSBP07858 OR2W2P-201ENST00000406313 909 ntBASIC13.17□□□□□ -0.3
CTSBP07858 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSBP07858 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 RPL13AP19-201ENST00000434320 584 ntBASIC13.17□□□□□ -0.3
CTSBP07858 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 AC093909.3-201ENST00000504783 336 ntBASIC13.17□□□□□ -0.3
CTSBP07858 AC093300.1-201ENST00000510368 1201 ntBASIC13.17□□□□□ -0.3
CTSBP07858 COQ10BP2-201ENST00000513804 724 ntBASIC13.17□□□□□ -0.3
CTSBP07858 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSBP07858 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 LINC00431-202ENST00000636375 159 ntBASIC13.17□□□□□ -0.3
CTSBP07858 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CTSBP07858 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CTSBP07858 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CTSBP07858 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSBP07858 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSBP07858 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 AC025271.4-201ENST00000621477 1726 ntBASIC13.16□□□□□ -0.3
CTSBP07858 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSBP07858 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 AC130686.1-201ENST00000622936 2466 ntBASIC13.16□□□□□ -0.3
CTSBP07858 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSBP07858 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CTSBP07858 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CTSBP07858 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSBP07858 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.16□□□□□ -0.3
CTSBP07858 RPL35P9-201ENST00000446059 350 ntBASIC13.16□□□□□ -0.3
CTSBP07858 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSBP07858 AC098799.1-201ENST00000504752 800 ntBASIC13.16□□□□□ -0.3
CTSBP07858 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSBP07858 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSBP07858 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSBP07858 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms