Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
APOBP04114 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
APOBP04114 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
APOBP04114 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
APOBP04114 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
APOBP04114 AC008040.3-201ENST00000493762 1232 ntBASIC8.3□□□□□ -1.08
APOBP04114 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 AC018868.2-201ENST00000559655 1259 ntBASIC8.3□□□□□ -1.08
APOBP04114 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC8.3□□□□□ -1.08
APOBP04114 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 AC108082.1-201ENST00000510857 331 ntBASIC8.3□□□□□ -1.08
APOBP04114 SLC25A51P3-201ENST00000521814 889 ntBASIC8.3□□□□□ -1.08
APOBP04114 AC131274.3-201ENST00000578745 1271 ntBASIC8.3□□□□□ -1.08
APOBP04114 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC8.3□□□□□ -1.08
APOBP04114 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 AP006621.5-202ENST00000623692 636 ntBASIC8.3□□□□□ -1.08
APOBP04114 AL139424.3-202ENST00000641619 917 ntBASIC8.3□□□□□ -1.08
APOBP04114 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 FTH1P19-201ENST00000402402 528 ntBASIC8.3□□□□□ -1.08
APOBP04114 SNORD88B-201ENST00000408454 91 ntBASIC8.3□□□□□ -1.08
APOBP04114 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC8.3□□□□□ -1.08
APOBP04114 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC8.3□□□□□ -1.08
APOBP04114 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 AC027601.5-201ENST00000624065 2482 ntBASIC8.3□□□□□ -1.08
APOBP04114 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
APOBP04114 AL357054.1-201ENST00000407035 1227 ntBASIC8.3□□□□□ -1.08
APOBP04114 AKR1C5P-201ENST00000427165 609 ntBASIC8.3□□□□□ -1.08
APOBP04114 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 RN7SL225P-201ENST00000464648 298 ntBASIC8.3□□□□□ -1.08
APOBP04114 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC8.3□□□□□ -1.08
APOBP04114 ST3GAL1P1-201ENST00000513810 1014 ntBASIC8.3□□□□□ -1.08
APOBP04114 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC8.3□□□□□ -1.08
APOBP04114 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC8.3□□□□□ -1.08
APOBP04114 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 CALM3-206ENST00000594523 540 ntTSL 4 BASIC8.3□□□□□ -1.08
APOBP04114 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC8.3□□□□□ -1.08
APOBP04114 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC8.3□□□□□ -1.08
APOBP04114 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 SLC9A7P1-201ENST00000554295 3311 ntBASIC8.3□□□□□ -1.08
APOBP04114 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC8.3□□□□□ -1.08
APOBP04114 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
APOBP04114 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 Z98259.1-201ENST00000564261 1697 ntBASIC8.29□□□□□ -1.08
APOBP04114 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC8.29□□□□□ -1.08
APOBP04114 RN7SL452P-201ENST00000482923 291 ntBASIC8.29□□□□□ -1.08
APOBP04114 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 AC126471.1-201ENST00000550676 362 ntBASIC8.29□□□□□ -1.08
APOBP04114 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 AC018755.1-201ENST00000601315 1182 ntBASIC8.29□□□□□ -1.08
APOBP04114 AC020763.2-201ENST00000623155 1255 ntBASIC8.29□□□□□ -1.08
APOBP04114 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms