Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
VTNP04004 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
VTNP04004 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VTNP04004 FAM90A21P-201ENST00000510875 1396 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A15P-201ENST00000514465 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A6P-201ENST00000515148 1394 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A16P-201ENST00000526662 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A9P-201ENST00000527940 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A5P-201ENST00000528738 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A14P-201ENST00000530386 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 FAM90A13P-201ENST00000534703 1395 ntBASIC15.24■□□□□ 0.03
VTNP04004 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.23■□□□□ 0.03
VTNP04004 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VTNP04004 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 AGAP10P-201ENST00000454844 2418 ntBASIC15.23■□□□□ 0.03
VTNP04004 AC089987.1-201ENST00000551654 2209 ntBASIC15.23■□□□□ 0.03
VTNP04004 AC005089.1-201ENST00000619486 2241 ntBASIC15.23■□□□□ 0.03
VTNP04004 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.23■□□□□ 0.03
VTNP04004 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VTNP04004 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 ACTBP14-201ENST00000411655 1089 ntBASIC15.23■□□□□ 0.03
VTNP04004 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.23■□□□□ 0.03
VTNP04004 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.23■□□□□ 0.03
VTNP04004 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.23■□□□□ 0.03
VTNP04004 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.23■□□□□ 0.03
VTNP04004 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VTNP04004 AC090136.2-201ENST00000517809 420 ntBASIC15.23■□□□□ 0.03
VTNP04004 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 AP005264.6-204ENST00000588436 719 ntBASIC15.23■□□□□ 0.03
VTNP04004 MIR6756-201ENST00000616240 63 ntBASIC15.23■□□□□ 0.03
VTNP04004 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.23■□□□□ 0.03
VTNP04004 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VTNP04004 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VTNP04004 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.23■□□□□ 0.03
VTNP04004 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VTNP04004 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 PSMD4P1-201ENST00000433951 1109 ntBASIC15.22■□□□□ 0.03
VTNP04004 KRT18P46-201ENST00000435568 1279 ntBASIC15.22■□□□□ 0.03
VTNP04004 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 GULOP-201ENST00000454030 748 ntBASIC15.22■□□□□ 0.03
VTNP04004 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.22■□□□□ 0.03
VTNP04004 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 AC141586.1-203ENST00000567242 366 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms