Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HNRNPA1P3-201ENST00000440968 551 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 KRT18P42-201ENST00000505048 1255 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 METTL7AP1-201ENST00000547343 496 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC13.82□□□□□ -0.2
PDGFBP01127 PPY-202ENST00000587006 431 ntTSL 3 BASIC13.82□□□□□ -0.2
PDGFBP01127 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 MIR6074-201ENST00000612054 107 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 AC245369.8-201ENST00000636589 306 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.82□□□□□ -0.2
PDGFBP01127 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PDGFBP01127 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDGFBP01127 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDGFBP01127 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 DLX4-206ENST00000611342 1662 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 SPTLC1P3-201ENST00000403408 259 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 RBMXP1-201ENST00000408004 1191 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC13.81□□□□□ -0.2
PDGFBP01127 SDCBP2P1-201ENST00000416115 614 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 RBMX2P5-201ENST00000424312 969 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.81□□□□□ -0.2
PDGFBP01127 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
PDGFBP01127 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.81□□□□□ -0.2
PDGFBP01127 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.81□□□□□ -0.2
PDGFBP01127 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
PDGFBP01127 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 MIR6165-201ENST00000614803 84 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDGFBP01127 MIEF1-215ENST00000637854 213 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 KRT8P42-201ENST00000405771 1399 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 AC106872.9-201ENST00000512437 1393 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 AGAP7P-201ENST00000582299 2062 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 AGAP14-201ENST00000624701 2060 ntBASIC13.81□□□□□ -0.2
PDGFBP01127 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDGFBP01127 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
PDGFBP01127 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.81□□□□□ -0.2
PDGFBP01127 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDGFBP01127 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.8□□□□□ -0.2
PDGFBP01127 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PDGFBP01127 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.8□□□□□ -0.2
PDGFBP01127 PPT1-215ENST00000641471 2368 ntBASIC13.8□□□□□ -0.2
PDGFBP01127 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms