Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 TEKT4P2-202ENST00000559466 1312 ntBASIC12.35□□□□□ -0.43
NPIPB4C9JG80 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 POM121L14P-201ENST00000406100 1558 ntBASIC12.35□□□□□ -0.43
NPIPB4C9JG80 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.35□□□□□ -0.43
NPIPB4C9JG80 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC008132.1-202ENST00000342005 1389 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC020907.1-201ENST00000616460 1350 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 MIR1307-201ENST00000408840 149 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 FNTAP2-201ENST00000430308 634 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC026803.1-201ENST00000569130 274 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 MIR4538-201ENST00000581377 78 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AL513497.1-201ENST00000624273 2083 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 AL359183.1-201ENST00000623796 2132 ntBASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPB4C9JG80 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
NPIPB4C9JG80 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
NPIPB4C9JG80 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.33□□□□□ -0.44
NPIPB4C9JG80 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB4C9JG80 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms