Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 MTX1P1-201ENST00000440904 838 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 RPSAP36-202ENST00000494591 1261 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 ACTG1P17-201ENST00000558391 1119 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 ECM1P1-201ENST00000604092 1279 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AC006453.4-201ENST00000636949 1252 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TNRC18P1-201ENST00000502875 3650 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 SLC25A24P2-201ENST00000415059 510 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AL161932.2-201ENST00000435436 679 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC027237.1-201ENST00000560942 655 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC005586.2-201ENST00000563946 837 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC104982.3-201ENST00000581995 514 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC104506.1-201ENST00000609247 429 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 AC005014.1-201ENST00000432006 2976 ntBASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM55Q9BYV6 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 ABCD1P2-201ENST00000429313 1601 ntBASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 Z98257.2-202ENST00000641138 1548 ntBASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms