Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RN7SL752P-201ENST00000463779 287 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 AP003171.2-201ENST00000528208 925 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 AC027237.1-201ENST00000560942 655 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 AC025279.2-201ENST00000569730 653 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 AC008620.2-201ENST00000510294 1569 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFT1Q96AA3 AC102953.2-201ENST00000609755 3026 ntBASIC12.51□□□□□ -0.41
RFT1Q96AA3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.51□□□□□ -0.41
RFT1Q96AA3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 OR2I1P-208ENST00000641137 4948 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 FAM197Y7-201ENST00000432892 766 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 C2orf27AP3-201ENST00000434123 579 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 CRB3P1-201ENST00000449338 276 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AL354718.3-201ENST00000616414 581 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 CR382287.1-201ENST00000623954 586 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AC064801.2-201ENST00000625052 1303 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AL354989.2-201ENST00000435838 1540 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 LINC01165-201ENST00000445190 1623 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 MAPK10-262ENST00000641051 5738 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AP003969.2-201ENST00000623739 2275 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 AL645937.6-201ENST00000641122 3727 ntBASIC12.5□□□□□ -0.41
RFT1Q96AA3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RFT1Q96AA3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RFT1Q96AA3 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AL021155.1-201ENST00000438808 2637 ntBASIC12.49□□□□□ -0.41
RFT1Q96AA3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.49□□□□□ -0.41
RFT1Q96AA3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms