Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 LINC01815-202ENST00000641468 1409 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 FTH1P22-201ENST00000456305 520 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CHCHD2P9-201ENST00000461726 456 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 AC138701.2-201ENST00000553634 226 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 AC005632.3-201ENST00000605544 308 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 AC087392.5-201ENST00000612517 489 ntBASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MIR645-201ENST00000385283 94 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AL512430.1-201ENST00000392575 860 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MIR4522-201ENST00000584932 87 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AL805961.1-201ENST00000642026 753 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AC007952.5-201ENST00000572818 1486 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AL591122.2-201ENST00000624125 1853 ntBASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms