Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ACTG1P2-201ENST00000415776 1125 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 ACTG1P11-201ENST00000425411 1125 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC104073.2-201ENST00000453737 312 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 RN7SL769P-201ENST00000469386 295 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 IMP3P2-201ENST00000489760 475 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 FGFR3P5-201ENST00000564496 886 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 RN7SL190P-201ENST00000582519 257 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC097724.1-201ENST00000609581 426 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 AC090164.2-201ENST00000611487 516 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 AL805961.1-203ENST00000641078 1258 ntBASIC9.42□□□□□ -0.9
SCXQ7RTU7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SCXQ7RTU7 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC9.42□□□□□ -0.9
SCXQ7RTU7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AP000845.1-201ENST00000581677 2131 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC008132.1-202ENST00000342005 1389 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 TP73-203ENST00000357733 4899 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ELK2AP-201ENST00000392510 1007 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms