Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 IFNWP2-201ENST00000431203 580 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 PGK1P2-201ENST00000431702 1214 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ALG1L7P-201ENST00000502317 768 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 KF455155.1-201ENST00000604493 303 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC026120.2-201ENST00000617239 309 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC020763.3-201ENST00000625095 2904 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHROOM1Q2M3G4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SHROOM1Q2M3G4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHROOM1Q2M3G4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SHROOM1Q2M3G4 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHROOM1Q2M3G4 TCAM1P-207ENST00000485295 1537 ntBASIC16.14■□□□□ 0.18
SHROOM1Q2M3G4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 ZNF877P-201ENST00000437614 612 ntBASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 SNX18-202ENST00000343017 3140 ntBASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHROOM1Q2M3G4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 AC041040.1-201ENST00000425197 460 ntBASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 AC104961.1-201ENST00000427605 771 ntBASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 AC079250.1-201ENST00000456046 531 ntBASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.13■□□□□ 0.17
SHROOM1Q2M3G4 AC012158.2-201ENST00000536546 354 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms