Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 MIR661-201ENST00000384842 89 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 PIN1P1-201ENST00000412108 996 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCR4P61073 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 AL355864.2-201ENST00000447420 863 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.8□□□□□ -0.36
CXCR4P61073 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCR4P61073 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCR4P61073 AP003171.2-201ENST00000528208 925 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.8□□□□□ -0.36
CXCR4P61073 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCR4P61073 AC025279.2-201ENST00000569730 653 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CXCR4P61073 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCR4P61073 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CXCR4P61073 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 IL9RP3-201ENST00000442856 1674 ntBASIC12.8□□□□□ -0.36
CXCR4P61073 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCR4P61073 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 CD8B2-202ENST00000417670 633 ntBASIC12.79□□□□□ -0.36
CXCR4P61073 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 AL590640.2-201ENST00000457038 527 ntBASIC12.79□□□□□ -0.36
CXCR4P61073 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCR4P61073 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCR4P61073 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCR4P61073 GNRHR2-203ENST00000581100 1187 ntBASIC12.79□□□□□ -0.36
CXCR4P61073 RN7SL204P-201ENST00000582831 262 ntBASIC12.79□□□□□ -0.36
CXCR4P61073 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CXCR4P61073 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCR4P61073 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCR4P61073 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCR4P61073 LINC00563-201ENST00000566370 1400 ntBASIC12.79□□□□□ -0.36
CXCR4P61073 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CXCR4P61073 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms