Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN6P56747 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN6P56747 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC064801.2-201ENST00000625052 1303 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 AC005912.2-201ENST00000619492 2400 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC126335.2-201ENST00000623362 4637 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN6P56747 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 PSAT1P2-201ENST00000426107 972 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN6P56747 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC025594.1-201ENST00000469533 543 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 AC087203.1-201ENST00000532111 1181 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 KNOP1P1-201ENST00000542108 989 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 CES1P2-201ENST00000566467 1242 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC104506.1-201ENST00000609247 429 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC138969.2-201ENST00000532739 9932 ntBASIC13.42□□□□□ -0.26
CLDN6P56747 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN6P56747 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CLDN6P56747 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CLDN6P56747 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN6P56747 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 AC140479.7-201ENST00000636301 2332 ntBASIC13.41□□□□□ -0.26
CLDN6P56747 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 AC015909.5-201ENST00000624336 2266 ntBASIC13.41□□□□□ -0.26
CLDN6P56747 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN6P56747 AL451000.1-201ENST00000451300 1186 ntBASIC13.41□□□□□ -0.26
CLDN6P56747 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN6P56747 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.41□□□□□ -0.26
CLDN6P56747 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.41□□□□□ -0.26
CLDN6P56747 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms