Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 FXNP2-201ENST00000411625 547 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 PPP1R2P4-201ENST00000424051 595 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 AL512306.1-201ENST00000432698 848 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 CHCHD2P9-201ENST00000461726 456 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 RN7SL81P-201ENST00000493781 261 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 SLC25A15P3-201ENST00000505530 290 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 RN7SL190P-201ENST00000582519 257 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 SPCS2P2-201ENST00000603270 608 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 AC005041.3-201ENST00000606287 649 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 AL590824.1-201ENST00000403828 1349 ntBASIC14.88□□□□□ -0.03
CACNA2D1P54289 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.88□□□□□ -0.03
CACNA2D1P54289 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CACNA2D1P54289 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.87□□□□□ -0.03
CACNA2D1P54289 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 RN7SL555P-201ENST00000584742 339 ntBASIC14.87□□□□□ -0.03
CACNA2D1P54289 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 AC005618.3-201ENST00000624928 458 ntBASIC14.87□□□□□ -0.03
CACNA2D1P54289 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CACNA2D1P54289 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CACNA2D1P54289 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CACNA2D1P54289 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CACNA2D1P54289 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CACNA2D1P54289 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CACNA2D1P54289 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CACNA2D1P54289 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CACNA2D1P54289 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CACNA2D1P54289 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms