Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 RPE-208ENST00000436630 1128 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 RN7SL677P-201ENST00000466970 319 ntBASIC20.24■□□□□ 0.83
KDM5CP41229 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC20.24■□□□□ 0.83
KDM5CP41229 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC20.24■□□□□ 0.83
KDM5CP41229 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC20.24■□□□□ 0.83
KDM5CP41229 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC20.24■□□□□ 0.83
KDM5CP41229 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC20.24■□□□□ 0.83
KDM5CP41229 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 CA6-205ENST00000480186 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC20.24■□□□□ 0.83
KDM5CP41229 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KDM5CP41229 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KDM5CP41229 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 MIR181D-201ENST00000384853 137 ntBASIC20.23■□□□□ 0.83
KDM5CP41229 RPSAP61-201ENST00000412542 878 ntBASIC20.23■□□□□ 0.83
KDM5CP41229 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC20.23■□□□□ 0.83
KDM5CP41229 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.23■□□□□ 0.83
KDM5CP41229 RN7SL69P-201ENST00000468423 272 ntBASIC20.23■□□□□ 0.83
KDM5CP41229 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC20.23■□□□□ 0.83
KDM5CP41229 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KDM5CP41229 HNRNPA1P4-201ENST00000509706 756 ntBASIC20.23■□□□□ 0.83
KDM5CP41229 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC20.23■□□□□ 0.83
KDM5CP41229 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 HNRNPA1P11-201ENST00000580106 956 ntBASIC20.23■□□□□ 0.83
KDM5CP41229 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.23■□□□□ 0.83
KDM5CP41229 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KDM5CP41229 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC20.23■□□□□ 0.83
KDM5CP41229 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KDM5CP41229 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM5CP41229 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 RNF7-205ENST00000480908 782 ntTSL 4 BASIC20.22■□□□□ 0.83
KDM5CP41229 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC20.22■□□□□ 0.83
KDM5CP41229 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC20.22■□□□□ 0.83
KDM5CP41229 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC20.22■□□□□ 0.83
KDM5CP41229 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.22■□□□□ 0.83
KDM5CP41229 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KDM5CP41229 AC245369.8-201ENST00000636589 306 ntBASIC20.22■□□□□ 0.83
KDM5CP41229 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KDM5CP41229 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KDM5CP41229 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDM5CP41229 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 RN7SL76P-201ENST00000482435 289 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 GOLGA2P10-201ENST00000550961 817 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC20.21■□□□□ 0.83
KDM5CP41229 MIR4539-201ENST00000579784 60 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 KRT18P8-201ENST00000581937 1246 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 AC022382.1-201ENST00000602768 336 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC20.21■□□□□ 0.83
KDM5CP41229 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC20.21■□□□□ 0.83
KDM5CP41229 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
KDM5CP41229 TCAM1P-207ENST00000485295 1537 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 AC090643.2-201ENST00000623442 2029 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KDM5CP41229 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
KDM5CP41229 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms