Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 AC010086.2-201ENST00000428616 226 ntBASIC17.42■□□□□ 0.38
COL15A1P39059 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC17.42■□□□□ 0.38
COL15A1P39059 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.42■□□□□ 0.38
COL15A1P39059 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC17.42■□□□□ 0.38
COL15A1P39059 CR392039.2-201ENST00000623182 509 ntBASIC17.42■□□□□ 0.38
COL15A1P39059 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.42■□□□□ 0.38
COL15A1P39059 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL15A1P39059 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.41■□□□□ 0.38
COL15A1P39059 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COL15A1P39059 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 SNORA50C-201ENST00000408535 133 ntBASIC17.41■□□□□ 0.38
COL15A1P39059 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.41■□□□□ 0.38
COL15A1P39059 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.41■□□□□ 0.38
COL15A1P39059 RNU1-80P-201ENST00000459500 161 ntBASIC17.41■□□□□ 0.38
COL15A1P39059 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.41■□□□□ 0.38
COL15A1P39059 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.41■□□□□ 0.38
COL15A1P39059 SNORA50.1-201ENST00000628590 135 ntBASIC17.41■□□□□ 0.38
COL15A1P39059 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COL15A1P39059 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 KRT8P42-201ENST00000405771 1399 ntBASIC17.41■□□□□ 0.38
COL15A1P39059 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.41■□□□□ 0.38
COL15A1P39059 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.41■□□□□ 0.38
COL15A1P39059 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL15A1P39059 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL15A1P39059 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 CCL19-202ENST00000378800 414 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 RPL29P2-202ENST00000498671 657 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 AC147876.1-201ENST00000504408 322 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 RPSAP70-201ENST00000504462 864 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC17.4■□□□□ 0.38
COL15A1P39059 SRPK2P-201ENST00000523408 1100 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 RN7SL524P-201ENST00000581152 300 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 AC132812.1-201ENST00000583145 892 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COL15A1P39059 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms