Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.4■□□□□ 0.06
KRT9P35527 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.4■□□□□ 0.06
KRT9P35527 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.4■□□□□ 0.06
KRT9P35527 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.4■□□□□ 0.06
KRT9P35527 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 AC115284.2-201ENST00000624646 2054 ntBASIC15.4■□□□□ 0.06
KRT9P35527 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
KRT9P35527 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.39■□□□□ 0.06
KRT9P35527 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KRT9P35527 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT9P35527 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT9P35527 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 RPL13AP20-201ENST00000459725 609 ntBASIC15.39■□□□□ 0.05
KRT9P35527 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
KRT9P35527 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 AC003686.1-201ENST00000550956 1034 ntBASIC15.39■□□□□ 0.05
KRT9P35527 AL160314.3-201ENST00000556041 767 ntBASIC15.39■□□□□ 0.05
KRT9P35527 AC140658.4-201ENST00000561990 352 ntBASIC15.39■□□□□ 0.05
KRT9P35527 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT9P35527 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT9P35527 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT9P35527 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT9P35527 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT9P35527 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT9P35527 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT9P35527 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT9P35527 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT9P35527 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
KRT9P35527 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT9P35527 KRT8P29-201ENST00000420409 1371 ntBASIC15.38■□□□□ 0.05
KRT9P35527 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
KRT9P35527 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT9P35527 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
KRT9P35527 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
KRT9P35527 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
KRT9P35527 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
KRT9P35527 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT9P35527 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms