Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.87□□□□□ -0.51
COL8A2P25067 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.87□□□□□ -0.51
COL8A2P25067 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.87□□□□□ -0.51
COL8A2P25067 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.87□□□□□ -0.51
COL8A2P25067 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
COL8A2P25067 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC11.86□□□□□ -0.51
COL8A2P25067 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC11.86□□□□□ -0.51
COL8A2P25067 RGS5-216ENST00000449680 788 ntTSL 3 BASIC11.86□□□□□ -0.51
COL8A2P25067 GRPEL2P1-201ENST00000453145 339 ntBASIC11.86□□□□□ -0.51
COL8A2P25067 DPY19L2P5-201ENST00000456300 331 ntBASIC11.86□□□□□ -0.51
COL8A2P25067 AC018463.1-201ENST00000456674 917 ntBASIC11.86□□□□□ -0.51
COL8A2P25067 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.86□□□□□ -0.51
COL8A2P25067 AC007952.4-201ENST00000573866 637 ntBASIC11.86□□□□□ -0.51
COL8A2P25067 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC11.86□□□□□ -0.51
COL8A2P25067 AP001065.2-201ENST00000617205 644 ntBASIC11.86□□□□□ -0.51
COL8A2P25067 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
COL8A2P25067 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
COL8A2P25067 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
COL8A2P25067 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
COL8A2P25067 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11.86□□□□□ -0.51
COL8A2P25067 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
COL8A2P25067 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 IL9RP3-201ENST00000442856 1674 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.85□□□□□ -0.51
COL8A2P25067 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 KRT8P43-201ENST00000406052 1458 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.85□□□□□ -0.51
COL8A2P25067 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms