Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCND1P24385 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCND1P24385 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCND1P24385 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCND1P24385 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.21□□□□□ -0.13
CCND1P24385 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCND1P24385 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 MIR658-201ENST00000385210 100 ntBASIC14.21□□□□□ -0.13
CCND1P24385 ATP5G2P4-201ENST00000442175 420 ntBASIC14.21□□□□□ -0.13
CCND1P24385 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.21□□□□□ -0.13
CCND1P24385 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCND1P24385 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 AC132192.2-201ENST00000596206 1147 ntBASIC14.21□□□□□ -0.13
CCND1P24385 AC010328.2-201ENST00000597698 1111 ntBASIC14.21□□□□□ -0.13
CCND1P24385 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.21□□□□□ -0.13
CCND1P24385 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCND1P24385 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCND1P24385 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.21□□□□□ -0.13
CCND1P24385 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCND1P24385 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCND1P24385 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.21□□□□□ -0.14
CCND1P24385 GHET1-201ENST00000627071 1906 ntBASIC14.21□□□□□ -0.14
CCND1P24385 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCND1P24385 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.21□□□□□ -0.14
CCND1P24385 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCND1P24385 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CCND1P24385 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 AC022400.8-201ENST00000623453 3599 ntBASIC14.2□□□□□ -0.14
CCND1P24385 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 AC003958.1-201ENST00000435883 421 ntBASIC14.2□□□□□ -0.14
CCND1P24385 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.2□□□□□ -0.14
CCND1P24385 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCND1P24385 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.2□□□□□ -0.14
CCND1P24385 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.2□□□□□ -0.14
CCND1P24385 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCND1P24385 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms