Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.81□□□□□ -0.68
RAB4AP20338 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SERBP1P3-201ENST00000459980 809 ntBASIC10.81□□□□□ -0.68
RAB4AP20338 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 RPL13AP23-201ENST00000480739 586 ntBASIC10.81□□□□□ -0.68
RAB4AP20338 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 AC092364.2-202ENST00000597012 1073 ntBASIC10.81□□□□□ -0.68
RAB4AP20338 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB4AP20338 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.81□□□□□ -0.68
RAB4AP20338 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB4AP20338 PCDHA6-201ENST00000378126 3267 ntBASIC10.81□□□□□ -0.68
RAB4AP20338 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RAB4AP20338 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 MICA-210ENST00000616296 2260 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB4AP20338 AL157996.1-201ENST00000624684 2299 ntBASIC10.81□□□□□ -0.68
RAB4AP20338 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB4AP20338 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 AC106820.4-201ENST00000561847 5616 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 AC115284.2-201ENST00000624646 2054 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 ACTG1P14-201ENST00000446382 1122 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB4AP20338 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.8□□□□□ -0.68
RAB4AP20338 KRT18P56-201ENST00000507275 550 ntBASIC10.8□□□□□ -0.68
RAB4AP20338 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB4AP20338 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
RAB4AP20338 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
RAB4AP20338 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
RAB4AP20338 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
RAB4AP20338 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB4AP20338 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB4AP20338 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms