Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.96□□□□□ -0.33
THBS1P07996 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.96□□□□□ -0.33
THBS1P07996 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.96□□□□□ -0.33
THBS1P07996 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.96□□□□□ -0.33
THBS1P07996 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 RNA5SP359-201ENST00000364838 113 ntBASIC12.96□□□□□ -0.33
THBS1P07996 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 AC006987.1-201ENST00000413610 527 ntBASIC12.96□□□□□ -0.33
THBS1P07996 BX679664.3-201ENST00000414070 555 ntBASIC12.96□□□□□ -0.33
THBS1P07996 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 RPS9P1-201ENST00000419943 583 ntBASIC12.96□□□□□ -0.33
THBS1P07996 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.96□□□□□ -0.33
THBS1P07996 AKR7A2P1-201ENST00000460134 915 ntBASIC12.96□□□□□ -0.33
THBS1P07996 AC113935.1-201ENST00000471722 555 ntBASIC12.96□□□□□ -0.33
THBS1P07996 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC12.96□□□□□ -0.33
THBS1P07996 AC116345.2-201ENST00000512837 523 ntBASIC12.96□□□□□ -0.33
THBS1P07996 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.96□□□□□ -0.33
THBS1P07996 RN7SL455P-201ENST00000580629 282 ntBASIC12.96□□□□□ -0.33
THBS1P07996 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.96□□□□□ -0.33
THBS1P07996 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.96□□□□□ -0.33
THBS1P07996 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.96□□□□□ -0.33
THBS1P07996 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 AL161773.1-201ENST00000624845 863 ntBASIC12.96□□□□□ -0.33
THBS1P07996 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
THBS1P07996 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
THBS1P07996 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.96□□□□□ -0.34
THBS1P07996 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
THBS1P07996 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
THBS1P07996 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
THBS1P07996 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.96□□□□□ -0.34
THBS1P07996 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
THBS1P07996 KRT8P21-201ENST00000430398 1491 ntBASIC12.96□□□□□ -0.34
THBS1P07996 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.96□□□□□ -0.34
THBS1P07996 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.96□□□□□ -0.34
THBS1P07996 AC138028.6-201ENST00000616106 1482 ntBASIC12.96□□□□□ -0.34
THBS1P07996 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
THBS1P07996 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
THBS1P07996 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.96□□□□□ -0.34
THBS1P07996 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
THBS1P07996 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
THBS1P07996 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.96□□□□□ -0.34
THBS1P07996 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 CICP20-201ENST00000443330 2801 ntBASIC12.95□□□□□ -0.34
THBS1P07996 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.95□□□□□ -0.34
THBS1P07996 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
THBS1P07996 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.95□□□□□ -0.34
THBS1P07996 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC12.95□□□□□ -0.34
THBS1P07996 AC125604.1-201ENST00000496255 707 ntBASIC12.95□□□□□ -0.34
THBS1P07996 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.95□□□□□ -0.34
THBS1P07996 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 KRT8P1-201ENST00000557533 1207 ntBASIC12.95□□□□□ -0.34
THBS1P07996 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.95□□□□□ -0.34
THBS1P07996 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
THBS1P07996 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms