Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NACAE9PAV3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AL359183.1-201ENST00000623796 2132 ntBASIC10.39□□□□□ -0.75
NACAE9PAV3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.39□□□□□ -0.75
NACAE9PAV3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
NACAE9PAV3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.39□□□□□ -0.75
NACAE9PAV3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.39□□□□□ -0.75
NACAE9PAV3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 MIR3615-201ENST00000581999 87 ntBASIC10.39□□□□□ -0.75
NACAE9PAV3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
NACAE9PAV3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AHCYP2-201ENST00000430630 1300 ntBASIC10.39□□□□□ -0.75
NACAE9PAV3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AL023775.1-201ENST00000454907 1746 ntBASIC10.39□□□□□ -0.75
NACAE9PAV3 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NACAE9PAV3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
NACAE9PAV3 AC102953.2-201ENST00000609755 3026 ntBASIC10.39□□□□□ -0.75
NACAE9PAV3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NACAE9PAV3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 AC010141.1-201ENST00000411585 623 ntBASIC10.38□□□□□ -0.75
NACAE9PAV3 AL157407.1-201ENST00000435784 904 ntBASIC10.38□□□□□ -0.75
NACAE9PAV3 KRT8P13-201ENST00000463294 1010 ntBASIC10.38□□□□□ -0.75
NACAE9PAV3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.38□□□□□ -0.75
NACAE9PAV3 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.38□□□□□ -0.75
NACAE9PAV3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.38□□□□□ -0.75
NACAE9PAV3 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
NACAE9PAV3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
NACAE9PAV3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NACAE9PAV3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms