Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
LOC285556D6RIA3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AL031577.1-201ENST00000339867 399 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AP000346.2-202ENST00000425948 383 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 IGHVII-33-1-201ENST00000524010 280 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AL031768.1-201ENST00000606542 701 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AC099063.4-201ENST00000641099 1602 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 AGAP10P-201ENST00000454844 2418 ntBASIC15.42■□□□□ 0.06
LOC285556D6RIA3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.42■□□□□ 0.06
LOC285556D6RIA3 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 POLR2LP1-206ENST00000444785 187 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 RPL3P9-201ENST00000463217 1183 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 RN7SL672P-201ENST00000474091 317 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 FRG2EP-201ENST00000634243 835 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 DLX4-206ENST00000611342 1662 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 AL359845.1-201ENST00000458202 1648 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 TBC1D3P1-201ENST00000590047 1693 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 CCL25-202ENST00000315626 450 ntTSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 AL356653.1-201ENST00000402743 360 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 AL954722.1-201ENST00000431238 259 ntBASIC15.41■□□□□ 0.06
LOC285556D6RIA3 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
LOC285556D6RIA3 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms