Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC091951.1-201ENST00000512854 2465 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 KRT8P24-201ENST00000560290 1559 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 OR2A15P-201ENST00000463814 900 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 RN7SL789P-201ENST00000478944 293 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 CYP4F10P-201ENST00000589560 752 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AL109983.1-201ENST00000603234 646 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 RN7SL827P-201ENST00000607480 288 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 MECP2-226ENST00000640414 897 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ATF4P4-201ENST00000393544 1930 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AL356583.1-201ENST00000398739 1371 ntBASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM88BA6NKF7 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 USP17L6P-201ENST00000382470 1197 ntBASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC067942.2-201ENST00000506227 1268 ntBASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC009238.3-201ENST00000512705 217 ntBASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 IGHV7-56-201ENST00000518372 351 ntBASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC103810.4-201ENST00000578601 257 ntBASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms