Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 AC098935.1-201ENST00000446057 611 ntBASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 POU5F1P2-201ENST00000521750 823 ntBASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 RN7SL121P-201ENST00000584223 273 ntBASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 MIR6769A-201ENST00000617340 73 ntBASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.66□□□□□ -0.22
CUEDC1Q9NWM3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AC068760.1-201ENST00000493579 1953 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AC116345.2-201ENST00000512837 523 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 PHBP15-201ENST00000574228 665 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AC020922.3-201ENST00000595064 547 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AL133499.1-201ENST00000596207 608 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AF254983.2-201ENST00000612331 135 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 RN7SL736P-201ENST00000613111 269 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CICP17-201ENST00000418553 2377 ntBASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms