Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 RPL10P12-201ENST00000427342 318 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AL606834.1-201ENST00000553836 1169 ntBASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.62□□□□□ -0.39
CHD8Q9HCK8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 FAM173B-207ENST00000511437 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC087441.1-201ENST00000531069 301 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC092368.1-201ENST00000568014 733 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RN7SL789P-201ENST00000478944 293 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC010395.2-201ENST00000509899 904 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RN7SL733P-201ENST00000582253 329 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RN7SL248P-201ENST00000615117 329 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 RN7SL453P-201ENST00000620275 329 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 AC138430.2-201ENST00000624068 504 ntBASIC12.61□□□□□ -0.39
CHD8Q9HCK8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHD8Q9HCK8 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AL807752.1-201ENST00000395082 1322 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms