Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AL008718.2-201ENST00000609206 1313 ntBASIC17.31■□□□□ 0.36
UPF2Q9HAU5 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC010141.1-201ENST00000411585 623 ntBASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 API5-211ENST00000534695 560 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 RBM8B-201ENST00000555532 525 ntBASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 PCDHB19P-202ENST00000625133 2914 ntBASIC17.3■□□□□ 0.36
UPF2Q9HAU5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AC112492.5-201ENST00000421897 457 ntBASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AL590640.2-201ENST00000457038 527 ntBASIC17.3■□□□□ 0.36
UPF2Q9HAU5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AC090386.2-201ENST00000623010 1039 ntBASIC17.3■□□□□ 0.36
UPF2Q9HAU5 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 AGGF1P10-201ENST00000635005 2191 ntBASIC17.3■□□□□ 0.36
UPF2Q9HAU5 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPF2Q9HAU5 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 MIR326-201ENST00000362220 95 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 SNORA50C-201ENST00000408535 133 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 UGT1A2P-201ENST00000454886 866 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC140658.4-201ENST00000561990 352 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC140912.1-201ENST00000577171 1054 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms