Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.4□□□□□ -0.26
CNTNAP3Q9BZ76 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.27
CNTNAP3Q9BZ76 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.27
CNTNAP3Q9BZ76 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 OR52M2P-201ENST00000414298 959 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 CCND3P1-201ENST00000438347 580 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AC133141.1-201ENST00000443015 339 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AC104117.4-201ENST00000521486 847 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 PDLIM1P1-201ENST00000604187 969 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 ZBED1P1-201ENST00000502364 1930 ntBASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CNTNAP3Q9BZ76 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 RNU1-80P-201ENST00000459500 161 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 RN7SKP155-201ENST00000516031 288 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AP005264.5-201ENST00000590066 467 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms