Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC015818.1-201ENST00000451011 244 ntBASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC114812.4-201ENST00000506676 757 ntBASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC023051.2-201ENST00000541141 460 ntBASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 MST1L-204ENST00000545160 559 ntTSL 4 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 PHBP18-201ENST00000546648 813 ntBASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 MYL6-215ENST00000549566 685 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 AC079331.1-201ENST00000623200 1200 ntBASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBGCP6Q96RT7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TUBGCP6Q96RT7 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 AC004910.1-201ENST00000433493 787 ntBASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 RCC2P1-201ENST00000452257 1476 ntBASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBGCP6Q96RT7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 YBX1P3-201ENST00000468366 909 ntBASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBGCP6Q96RT7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 MIR181D-201ENST00000384853 137 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 SNORA50C-201ENST00000408535 133 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 KRT18P15-201ENST00000458108 1291 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 AC112220.4-201ENST00000604982 1263 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 SNORA50.1-201ENST00000628590 135 ntBASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBGCP6Q96RT7 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms