Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 RPL8P2-201ENST00000430538 502 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 MIR4265-201ENST00000582152 99 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC012044.1-201ENST00000603431 297 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC006453.1-201ENST00000636037 1257 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AC092053.3-201ENST00000641308 4975 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC020763.3-201ENST00000625095 2904 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PES1P2-201ENST00000449745 1735 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC245140.2-201ENST00000624054 1939 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC007274.2-201ENST00000421675 662 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 SIGLEC22P-201ENST00000599104 714 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC091812.3-201ENST00000621362 345 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 AC009145.4-201ENST00000625119 1294 ntBASIC12.31□□□□□ -0.44
TMEM54Q969K7 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM54Q969K7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms