Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC092053.3-201ENST00000641308 4975 ntBASIC14.27□□□□□ -0.12
HLA-CQ95604 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-CQ95604 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-CQ95604 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-CQ95604 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HLA-CQ95604 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-CQ95604 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-CQ95604 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HLA-CQ95604 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 KLK8-203ENST00000347619 555 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-CQ95604 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 NAA10-205ENST00000393712 908 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-CQ95604 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 AC000078.1-201ENST00000420617 682 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 AL121578.1-201ENST00000428051 892 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 AKR1C6P-201ENST00000432950 983 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 AC008021.1-201ENST00000474180 414 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 NPM1P28-201ENST00000492269 840 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
HLA-CQ95604 METTL7AP1-201ENST00000547343 496 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-CQ95604 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 AC239600.1-201ENST00000603201 462 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 AC009812.1-201ENST00000605948 1059 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 AC244097.1-201ENST00000621631 1216 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HLA-CQ95604 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-CQ95604 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.27□□□□□ -0.13
HLA-CQ95604 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-CQ95604 AC007326.2-201ENST00000624224 7579 ntBASIC14.27□□□□□ -0.13
HLA-CQ95604 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-CQ95604 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-CQ95604 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-CQ95604 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-CQ95604 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 OR7E122P-201ENST00000383606 1017 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 PLAC9P1-203ENST00000440031 223 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 ZNF736P11Y-201ENST00000442535 1213 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 ZNF736P12Y-201ENST00000443152 1243 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 ZNF736P4Y-201ENST00000454995 1243 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 RPL3P9-201ENST00000463217 1183 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 OR2A1-AS1-203ENST00000468575 568 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 RN7SL638P-201ENST00000494527 290 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 AACSP1-202ENST00000521412 1095 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 FAM213AP2-201ENST00000521579 683 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-CQ95604 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-CQ95604 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 AL512356.3-201ENST00000623005 461 ntBASIC14.26□□□□□ -0.13
HLA-CQ95604 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-CQ95604 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-CQ95604 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-CQ95604 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AL354702.1-201ENST00000442006 1960 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.25□□□□□ -0.13
HLA-CQ95604 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms