Protein–RNA interactions for Protein: Q93077

HIST1H2AC, Histone H2A type 1-C, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ACQ93077 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 MIR658-201ENST00000385210 100 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RNMTL1P1-201ENST00000454103 560 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RPL18P13-201ENST00000478088 569 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RNA5SP412-201ENST00000516234 123 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 SCARNA21-201ENST00000517026 139 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RN7SL560P-201ENST00000577943 264 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 AL136295.7-201ENST00000619226 1200 ntBASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2ACQ93077 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 HSPB1P2-201ENST00000448722 546 ntBASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2ACQ93077 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms