Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AC025186.1-201ENST00000478174 870 ntBASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 RN7SL23P-201ENST00000484055 275 ntBASIC15.62■□□□□ 0.09
TRIM50Q86XT4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AC132825.4-202ENST00000578792 434 ntBASIC15.62■□□□□ 0.09
TRIM50Q86XT4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AL009176.1-201ENST00000607876 650 ntBASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.61■□□□□ 0.09
TRIM50Q86XT4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 CTBP2P8-201ENST00000422584 1330 ntBASIC15.61■□□□□ 0.09
TRIM50Q86XT4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM50Q86XT4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 AC117489.1-201ENST00000625169 3217 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 AC117503.4-201ENST00000623229 1418 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 EEF1DP2-201ENST00000433698 843 ntBASIC15.6■□□□□ 0.09
TRIM50Q86XT4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM50Q86XT4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms