Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 RNA5SP491-201ENST00000362936 118 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 U3.5-201ENST00000363448 216 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CTF2P-201ENST00000412003 604 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC092810.2-201ENST00000431570 362 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC103810.4-201ENST00000578601 257 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 FAM90A22P-201ENST00000400142 1395 ntBASIC12.8□□□□□ -0.36
CACNA1BQ00975 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.8□□□□□ -0.36
CACNA1BQ00975 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CACNA1BQ00975 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AL596087.1-201ENST00000400979 1969 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC064850.1-201ENST00000413279 1398 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RPSAP16-201ENST00000447583 821 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 PRAMEF35P-201ENST00000458709 891 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AP005121.2-201ENST00000583306 1101 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 FAM173B-207ENST00000511437 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 EEF1GP3-201ENST00000421044 1288 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC140658.2-201ENST00000566360 348 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 AC133555.4-201ENST00000569081 152 ntBASIC12.79□□□□□ -0.36
CACNA1BQ00975 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CACNA1BQ00975 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.79□□□□□ -0.36
CACNA1BQ00975 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 AC105250.1-201ENST00000509378 2057 ntBASIC12.78□□□□□ -0.36
CACNA1BQ00975 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 TPI1P3-201ENST00000335020 740 ntBASIC12.78□□□□□ -0.36
CACNA1BQ00975 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 AL021407.3-201ENST00000407522 486 ntBASIC12.78□□□□□ -0.36
CACNA1BQ00975 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC12.78□□□□□ -0.36
CACNA1BQ00975 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.78□□□□□ -0.36
CACNA1BQ00975 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.78□□□□□ -0.36
CACNA1BQ00975 FPGT-205ENST00000482102 561 ntTSL 4 BASIC12.78□□□□□ -0.36
CACNA1BQ00975 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.78□□□□□ -0.36
CACNA1BQ00975 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CACNA1BQ00975 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CACNA1BQ00975 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms