Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 TREML5P-201ENST00000421694 576 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 AC245100.3-201ENST00000441281 285 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.09□□□□□ -0.47
AP3S2P59780 FTLP10-202ENST00000505798 471 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
AP3S2P59780 AC069262.1-201ENST00000539058 672 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 BRI3BPP1-201ENST00000594224 787 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.09□□□□□ -0.47
AP3S2P59780 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S2P59780 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 CLUHP2-201ENST00000426660 1303 ntBASIC12.09□□□□□ -0.47
AP3S2P59780 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S2P59780 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S2P59780 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
AP3S2P59780 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.08□□□□□ -0.47
AP3S2P59780 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.08□□□□□ -0.47
AP3S2P59780 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
AP3S2P59780 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
AP3S2P59780 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S2P59780 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
AP3S2P59780 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.08□□□□□ -0.48
AP3S2P59780 AC009078.2-202ENST00000463353 338 ntBASIC12.08□□□□□ -0.48
AP3S2P59780 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 SLC25A1P1-201ENST00000528351 927 ntBASIC12.08□□□□□ -0.48
AP3S2P59780 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S2P59780 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S2P59780 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S2P59780 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S2P59780 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 AC021016.3-201ENST00000608367 477 ntBASIC12.08□□□□□ -0.48
AP3S2P59780 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 AC138466.3-201ENST00000619983 221 ntBASIC12.08□□□□□ -0.48
AP3S2P59780 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S2P59780 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 AL031432.4-201ENST00000641729 2190 ntBASIC12.08□□□□□ -0.48
AP3S2P59780 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S2P59780 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms