Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 AC009947.1-201ENST00000444350 727 ntBASIC12.3□□□□□ -0.44
DEFA3P59666 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.3□□□□□ -0.44
DEFA3P59666 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
DEFA3P59666 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
DEFA3P59666 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA3P59666 HERC2P10-201ENST00000570209 2393 ntBASIC12.3□□□□□ -0.44
DEFA3P59666 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 FAM90A17P-201ENST00000533716 1957 ntBASIC12.3□□□□□ -0.44
DEFA3P59666 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 AL512791.2-201ENST00000615251 4609 ntBASIC12.3□□□□□ -0.44
DEFA3P59666 POM121L7P-201ENST00000329949 2404 ntBASIC12.3□□□□□ -0.44
DEFA3P59666 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA3P59666 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA3P59666 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 RCC2P1-201ENST00000452257 1476 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 AC004832.2-201ENST00000426397 482 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 HNRNPDP1-201ENST00000439535 754 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
DEFA3P59666 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 AC138761.1-201ENST00000584393 385 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 AC004461.2-201ENST00000629517 803 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
DEFA3P59666 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 CICP19-201ENST00000632944 2357 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA3P59666 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TUBB3P1-201ENST00000405796 1332 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
DEFA3P59666 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
DEFA3P59666 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA3P59666 SMCR5-201ENST00000543475 2844 ntBASIC12.29□□□□□ -0.44
DEFA3P59666 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.28□□□□□ -0.44
DEFA3P59666 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
DEFA3P59666 MARK2P16-201ENST00000605714 1723 ntBASIC12.28□□□□□ -0.44
DEFA3P59666 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
DEFA3P59666 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms