Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SUMO3P55854 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 MIR1307-201ENST00000408840 149 ntBASIC12.67□□□□□ -0.38
SUMO3P55854 AC092573.1-201ENST00000433054 884 ntBASIC12.67□□□□□ -0.38
SUMO3P55854 ERP29P1-201ENST00000442902 706 ntBASIC12.67□□□□□ -0.38
SUMO3P55854 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SUMO3P55854 GRPEL2P1-201ENST00000453145 339 ntBASIC12.67□□□□□ -0.38
SUMO3P55854 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.67□□□□□ -0.38
SUMO3P55854 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.67□□□□□ -0.38
SUMO3P55854 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.67□□□□□ -0.38
SUMO3P55854 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 AC089987.1-201ENST00000551654 2209 ntBASIC12.67□□□□□ -0.38
SUMO3P55854 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SUMO3P55854 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.67□□□□□ -0.38
SUMO3P55854 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SUMO3P55854 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.67□□□□□ -0.38
SUMO3P55854 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.67□□□□□ -0.38
SUMO3P55854 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.67□□□□□ -0.38
SUMO3P55854 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.67□□□□□ -0.38
SUMO3P55854 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.67□□□□□ -0.38
SUMO3P55854 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SUMO3P55854 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SUMO3P55854 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 Z98885.3-201ENST00000624882 1757 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.66□□□□□ -0.38
SUMO3P55854 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SUMO3P55854 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.66□□□□□ -0.38
SUMO3P55854 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.66□□□□□ -0.38
SUMO3P55854 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 UPF3AP2-201ENST00000457924 1132 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 CHCHD2P9-201ENST00000461726 456 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 RN7SL769P-201ENST00000469386 295 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.66□□□□□ -0.38
SUMO3P55854 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
SUMO3P55854 AL049840.2-201ENST00000602722 535 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.66□□□□□ -0.38
SUMO3P55854 AC051619.9-201ENST00000623237 597 ntBASIC12.66□□□□□ -0.38
SUMO3P55854 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.66□□□□□ -0.38
SUMO3P55854 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SUMO3P55854 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.66□□□□□ -0.38
SUMO3P55854 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms