Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.47□□□□□ -0.41
LHX2P50458 DKKL1P1-201ENST00000400550 698 ntBASIC12.47□□□□□ -0.41
LHX2P50458 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 AC007279.1-201ENST00000448547 837 ntBASIC12.47□□□□□ -0.41
LHX2P50458 LDHBP1-201ENST00000455730 1119 ntBASIC12.47□□□□□ -0.41
LHX2P50458 AC006529.1-201ENST00000459978 637 ntBASIC12.47□□□□□ -0.41
LHX2P50458 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.47□□□□□ -0.41
LHX2P50458 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 IGHV3-37-201ENST00000518544 340 ntBASIC12.47□□□□□ -0.41
LHX2P50458 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 VENTXP3-201ENST00000546480 773 ntBASIC12.47□□□□□ -0.41
LHX2P50458 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.47□□□□□ -0.41
LHX2P50458 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 AC002044.2-201ENST00000624910 970 ntBASIC12.47□□□□□ -0.41
LHX2P50458 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LHX2P50458 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.47□□□□□ -0.41
LHX2P50458 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LHX2P50458 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LHX2P50458 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
LHX2P50458 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
LHX2P50458 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
LHX2P50458 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LHX2P50458 AC073210.1-201ENST00000414799 232 ntBASIC12.46□□□□□ -0.41
LHX2P50458 ACTG1P19-201ENST00000418987 1116 ntBASIC12.46□□□□□ -0.41
LHX2P50458 AC012362.1-201ENST00000434906 739 ntBASIC12.46□□□□□ -0.41
LHX2P50458 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.46□□□□□ -0.41
LHX2P50458 RPL35P9-201ENST00000446059 350 ntBASIC12.46□□□□□ -0.41
LHX2P50458 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
LHX2P50458 RN7SL23P-201ENST00000484055 275 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms