Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBRP36941 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.1□□□□□ -0.15
LTBRP36941 LINC02486-201ENST00000604157 3000 ntBASIC14.1□□□□□ -0.15
LTBRP36941 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 AL031587.5-201ENST00000624344 1849 ntBASIC14.1□□□□□ -0.15
LTBRP36941 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LTBRP36941 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBRP36941 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBRP36941 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LTBRP36941 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LTBRP36941 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LTBRP36941 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC14.09□□□□□ -0.15
LTBRP36941 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC14.09□□□□□ -0.15
LTBRP36941 AC092535.4-201ENST00000609548 397 ntBASIC14.09□□□□□ -0.15
LTBRP36941 AL137028.2-201ENST00000614601 256 ntBASIC14.09□□□□□ -0.15
LTBRP36941 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 AC113367.3-201ENST00000508316 1912 ntBASIC14.09□□□□□ -0.15
LTBRP36941 IMPDH1P5-201ENST00000439688 1540 ntBASIC14.09□□□□□ -0.15
LTBRP36941 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LTBRP36941 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC14.09□□□□□ -0.15
LTBRP36941 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBRP36941 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LTBRP36941 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LTBRP36941 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
LTBRP36941 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LTBRP36941 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LTBRP36941 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 AC061965.1-201ENST00000560524 1465 ntBASIC14.08□□□□□ -0.16
LTBRP36941 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC14.08□□□□□ -0.16
LTBRP36941 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LTBRP36941 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LTBRP36941 MIR193A-201ENST00000384882 88 ntBASIC14.08□□□□□ -0.16
LTBRP36941 MARCKSL1P2-201ENST00000401037 976 ntBASIC14.08□□□□□ -0.16
LTBRP36941 AC079325.1-201ENST00000430386 857 ntBASIC14.08□□□□□ -0.16
LTBRP36941 RBPMSLP-201ENST00000433427 502 ntBASIC14.08□□□□□ -0.16
LTBRP36941 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LTBRP36941 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms