Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 HIST2H2BB-201ENST00000449108 381 ntBASIC13.91□□□□□ -0.18
SOX11P35716 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.91□□□□□ -0.18
SOX11P35716 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.91□□□□□ -0.18
SOX11P35716 AC244452.3-201ENST00000636814 210 ntBASIC13.91□□□□□ -0.18
SOX11P35716 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SOX11P35716 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 AC138028.6-201ENST00000616106 1482 ntBASIC13.91□□□□□ -0.18
SOX11P35716 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 AC068760.1-201ENST00000493579 1953 ntBASIC13.91□□□□□ -0.18
SOX11P35716 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX11P35716 AC092053.3-201ENST00000641308 4975 ntBASIC13.9□□□□□ -0.18
SOX11P35716 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SOX11P35716 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX11P35716 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.9□□□□□ -0.18
SOX11P35716 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.9□□□□□ -0.18
SOX11P35716 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.9□□□□□ -0.18
SOX11P35716 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.9□□□□□ -0.18
SOX11P35716 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.9□□□□□ -0.18
SOX11P35716 SCARNA20.5-201ENST00000516991 142 ntBASIC13.9□□□□□ -0.18
SOX11P35716 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX11P35716 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.9□□□□□ -0.18
SOX11P35716 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.9□□□□□ -0.18
SOX11P35716 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.9□□□□□ -0.18
SOX11P35716 AP001002.2-201ENST00000625137 386 ntBASIC13.9□□□□□ -0.18
SOX11P35716 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SOX11P35716 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 KRT8P4-201ENST00000509735 1454 ntBASIC13.9□□□□□ -0.18
SOX11P35716 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
SOX11P35716 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX11P35716 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX11P35716 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
SOX11P35716 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.9□□□□□ -0.19
SOX11P35716 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.9□□□□□ -0.19
SOX11P35716 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
SOX11P35716 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SOX11P35716 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.89□□□□□ -0.19
SOX11P35716 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SOX11P35716 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
SOX11P35716 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.89□□□□□ -0.19
SOX11P35716 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SOX11P35716 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms