Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 DLX4-206ENST00000611342 1662 ntBASIC15.42■□□□□ 0.06
KRT9P35527 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT9P35527 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.42■□□□□ 0.06
KRT9P35527 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT9P35527 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.42■□□□□ 0.06
KRT9P35527 AC005962.1-201ENST00000584100 773 ntBASIC15.42■□□□□ 0.06
KRT9P35527 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT9P35527 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT9P35527 AC026271.4-201ENST00000578214 1833 ntBASIC15.42■□□□□ 0.06
KRT9P35527 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT9P35527 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT9P35527 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KRT9P35527 LINC00638-201ENST00000555578 2518 ntBASIC15.42■□□□□ 0.06
KRT9P35527 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT9P35527 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 BTBD6P1-201ENST00000412176 1267 ntBASIC15.41■□□□□ 0.06
KRT9P35527 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT9P35527 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 HSPB1P2-201ENST00000448722 546 ntBASIC15.41■□□□□ 0.06
KRT9P35527 TUBB8P8-201ENST00000458717 1058 ntBASIC15.41■□□□□ 0.06
KRT9P35527 RPSAP36-202ENST00000494591 1261 ntBASIC15.41■□□□□ 0.06
KRT9P35527 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 AL591471.1-201ENST00000621855 229 ntBASIC15.41■□□□□ 0.06
KRT9P35527 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 AL031719.1-201ENST00000623365 2587 ntBASIC15.41■□□□□ 0.06
KRT9P35527 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT9P35527 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
KRT9P35527 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 AC144522.1-201ENST00000625111 1658 ntBASIC15.41■□□□□ 0.06
KRT9P35527 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 SHMT1P1-201ENST00000419974 1312 ntBASIC15.41■□□□□ 0.06
KRT9P35527 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT9P35527 POM121L14P-201ENST00000406100 1558 ntBASIC15.41■□□□□ 0.06
KRT9P35527 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT9P35527 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 AL118506.1-201ENST00000601296 3082 ntBASIC15.4■□□□□ 0.06
KRT9P35527 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
KRT9P35527 LINC01165-201ENST00000445190 1623 ntBASIC15.4■□□□□ 0.06
KRT9P35527 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT9P35527 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
KRT9P35527 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 GK-202ENST00000378941 458 ntTSL 3 BASIC15.4■□□□□ 0.06
KRT9P35527 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
KRT9P35527 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT9P35527 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KRT9P35527 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 919.8 ms