Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 AC012362.1-201ENST00000434906 739 ntBASIC12.09□□□□□ -0.47
CD40P25942 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 RN7SL375P-201ENST00000492442 298 ntBASIC12.09□□□□□ -0.47
CD40P25942 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.09□□□□□ -0.47
CD40P25942 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CD40P25942 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CD40P25942 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD40P25942 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CD40P25942 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
CD40P25942 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CD40P25942 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.08□□□□□ -0.47
CD40P25942 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.08□□□□□ -0.48
CD40P25942 OR2W2P-201ENST00000406313 909 ntBASIC12.08□□□□□ -0.48
CD40P25942 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.08□□□□□ -0.48
CD40P25942 OR52M2P-201ENST00000414298 959 ntBASIC12.08□□□□□ -0.48
CD40P25942 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.08□□□□□ -0.48
CD40P25942 PRSS3P1-201ENST00000503996 742 ntBASIC12.08□□□□□ -0.48
CD40P25942 RN7SKP155-201ENST00000516031 288 ntBASIC12.08□□□□□ -0.48
CD40P25942 IGHV3-37-201ENST00000518544 340 ntBASIC12.08□□□□□ -0.48
CD40P25942 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.08□□□□□ -0.48
CD40P25942 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 AL031673.1-201ENST00000611460 466 ntBASIC12.08□□□□□ -0.48
CD40P25942 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CD40P25942 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.08□□□□□ -0.48
CD40P25942 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 AL157996.1-201ENST00000624684 2299 ntBASIC12.08□□□□□ -0.48
CD40P25942 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
CD40P25942 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
CD40P25942 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD40P25942 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD40P25942 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.07□□□□□ -0.48
CD40P25942 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.07□□□□□ -0.48
CD40P25942 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms