Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 CR383656.2-201ENST00000548656 2254 ntBASIC15.44■□□□□ 0.06
GAP43P17677 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
GAP43P17677 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.44■□□□□ 0.06
GAP43P17677 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.44■□□□□ 0.06
GAP43P17677 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.44■□□□□ 0.06
GAP43P17677 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 CAP2P1-201ENST00000557743 1390 ntBASIC15.44■□□□□ 0.06
GAP43P17677 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 NRADDP-202ENST00000641269 1585 ntBASIC15.44■□□□□ 0.06
GAP43P17677 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GAP43P17677 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.44■□□□□ 0.06
GAP43P17677 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GAP43P17677 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.43■□□□□ 0.06
GAP43P17677 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
GAP43P17677 AC005722.1-201ENST00000431878 964 ntBASIC15.43■□□□□ 0.06
GAP43P17677 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.43■□□□□ 0.06
GAP43P17677 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.43■□□□□ 0.06
GAP43P17677 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.43■□□□□ 0.06
GAP43P17677 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 DMBT1P1-203ENST00000636837 4628 ntBASIC15.43■□□□□ 0.06
GAP43P17677 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
GAP43P17677 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GAP43P17677 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.43■□□□□ 0.06
GAP43P17677 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
GAP43P17677 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GAP43P17677 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.42■□□□□ 0.06
GAP43P17677 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GAP43P17677 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.42■□□□□ 0.06
GAP43P17677 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.42■□□□□ 0.06
GAP43P17677 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 Z98885.3-201ENST00000624882 1757 ntBASIC15.42■□□□□ 0.06
GAP43P17677 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.42■□□□□ 0.06
GAP43P17677 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.42■□□□□ 0.06
GAP43P17677 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.42■□□□□ 0.06
GAP43P17677 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GAP43P17677 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.42■□□□□ 0.06
GAP43P17677 IGHJ2P-201ENST00000454480 60 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms