Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
CD28P10747 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC11.02□□□□□ -0.65
CD28P10747 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC11.02□□□□□ -0.65
CD28P10747 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC11.02□□□□□ -0.65
CD28P10747 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC11.02□□□□□ -0.65
CD28P10747 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC11.02□□□□□ -0.65
CD28P10747 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 AC127024.7-201ENST00000625101 200 ntBASIC11.02□□□□□ -0.65
CD28P10747 LINC00431-202ENST00000636375 159 ntBASIC11.02□□□□□ -0.65
CD28P10747 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 RN7SL832P-201ENST00000607781 1756 ntBASIC11.02□□□□□ -0.65
CD28P10747 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.02□□□□□ -0.65
CD28P10747 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CD28P10747 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
CD28P10747 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CD28P10747 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 AL357563.1-201ENST00000404728 395 ntBASIC11.01□□□□□ -0.65
CD28P10747 CELP-201ENST00000411440 1249 ntTSL 5 BASIC11.01□□□□□ -0.65
CD28P10747 BX679664.3-201ENST00000414070 555 ntBASIC11.01□□□□□ -0.65
CD28P10747 CSNK1G2P1-201ENST00000442675 955 ntBASIC11.01□□□□□ -0.65
CD28P10747 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 AC113935.1-201ENST00000471722 555 ntBASIC11.01□□□□□ -0.65
CD28P10747 RN7SL564P-201ENST00000496309 250 ntBASIC11.01□□□□□ -0.65
CD28P10747 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 KLF17P1-201ENST00000547105 1126 ntBASIC11.01□□□□□ -0.65
CD28P10747 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 MIR5196-201ENST00000578146 115 ntBASIC11.01□□□□□ -0.65
CD28P10747 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC11.01□□□□□ -0.65
CD28P10747 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
CD28P10747 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.01□□□□□ -0.65
CD28P10747 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CD28P10747 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms