Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 FAM90A12P-201ENST00000519497 2375 ntBASIC13.21□□□□□ -0.29
CTSBP07858 FAM90A24P-201ENST00000520792 2369 ntBASIC13.21□□□□□ -0.29
CTSBP07858 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.21□□□□□ -0.29
CTSBP07858 AC026410.1-201ENST00000507366 1101 ntBASIC13.21□□□□□ -0.29
CTSBP07858 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 AC100858.1-201ENST00000514059 1228 ntBASIC13.21□□□□□ -0.29
CTSBP07858 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 AC226150.1-201ENST00000544259 466 ntBASIC13.21□□□□□ -0.29
CTSBP07858 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSBP07858 AL132780.4-201ENST00000624870 1135 ntBASIC13.21□□□□□ -0.29
CTSBP07858 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSBP07858 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
CTSBP07858 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSBP07858 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CTSBP07858 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CTSBP07858 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.21□□□□□ -0.3
CTSBP07858 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.21□□□□□ -0.3
CTSBP07858 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CTSBP07858 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.21□□□□□ -0.3
CTSBP07858 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CTSBP07858 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSBP07858 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CTSBP07858 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CTSBP07858 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSBP07858 AK2P2-201ENST00000439142 405 ntBASIC13.2□□□□□ -0.3
CTSBP07858 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSBP07858 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSBP07858 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSBP07858 MIR4326-201ENST00000582203 59 ntBASIC13.2□□□□□ -0.3
CTSBP07858 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 AL118522.1-201ENST00000611368 560 ntBASIC13.2□□□□□ -0.3
CTSBP07858 AC009084.3-201ENST00000623356 437 ntBASIC13.2□□□□□ -0.3
CTSBP07858 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSBP07858 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTSBP07858 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 SALL4P6-201ENST00000429385 1691 ntBASIC13.2□□□□□ -0.3
CTSBP07858 AC020763.3-201ENST00000625095 2904 ntBASIC13.2□□□□□ -0.3
CTSBP07858 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CTSBP07858 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms