Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
USH2AO75445 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 FTH1P19-201ENST00000402402 528 ntBASIC6□□□□□ -1.45
USH2AO75445 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC6□□□□□ -1.45
USH2AO75445 AC025165.4-201ENST00000602327 433 ntBASIC6□□□□□ -1.45
USH2AO75445 MIR6880-201ENST00000622851 62 ntBASIC6□□□□□ -1.45
USH2AO75445 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 BANP-204ENST00000393208 2283 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 SAA2-206ENST00000530400 323 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 AL353997.3-201ENST00000586597 589 ntBASIC6□□□□□ -1.45
USH2AO75445 AC078880.3-201ENST00000603439 1121 ntBASIC6□□□□□ -1.45
USH2AO75445 AL355353.1-201ENST00000604014 330 ntBASIC6□□□□□ -1.45
USH2AO75445 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC6□□□□□ -1.45
USH2AO75445 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ARHGAP23P1-201ENST00000562773 1937 ntBASIC6□□□□□ -1.45
USH2AO75445 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 AL031587.5-201ENST00000624344 1849 ntBASIC6□□□□□ -1.45
USH2AO75445 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC6□□□□□ -1.45
USH2AO75445 CACYBPP3-201ENST00000406011 625 ntBASIC6□□□□□ -1.45
USH2AO75445 PTPA-219ENST00000435305 530 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 AC009238.3-201ENST00000512705 217 ntBASIC6□□□□□ -1.45
USH2AO75445 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 AC063924.1-201ENST00000546680 673 ntBASIC6□□□□□ -1.45
USH2AO75445 IGHV1OR16-3-201ENST00000568138 205 ntBASIC6□□□□□ -1.45
USH2AO75445 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 AC239859.5-201ENST00000614100 1232 ntBASIC6□□□□□ -1.45
USH2AO75445 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC6□□□□□ -1.45
USH2AO75445 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 AC092966.1-201ENST00000414895 526 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms